Description
collagen, type XII, alpha 1
Location
Chromosome 6: 75,084,326-75,206,051 reverse strand.
VEGA68:CM000668.2
About this gene
This gene has 10 transcripts (splice variants), 10 orthologues and 8 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| COL12A1-001 | OTTHUMT00000041249.3 | 11723 | 3063aa | OTTHUMP00000016752 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS43482 | Q99715 | |
| COL12A1-002 | OTTHUMT00000041250.2 | 5886 | 1899aa | OTTHUMP00000016753 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS43481 | - | |
| COL12A1-003 | OTTHUMT00000041251.3 | 9637 | 3062aa | OTTHUMP00000219428 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RGG3 | |
| COL12A1-009 | OTTHUMT00000363218.2 | 8964 | 2987aa | OTTHUMP00000219466 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| COL12A1-008 | OTTHUMT00000041256.3 | 3135 | 756aa | OTTHUMP00000194828 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| COL12A1-007 | OTTHUMT00000041255.3 | 1914 | 638aa | OTTHUMP00000194827 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| COL12A1-006 | OTTHUMT00000041254.2 | 794 | 207aa | OTTHUMP00000219429 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| COL12A1-010 | OTTHUMT00000363223.1 | 571 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| COL12A1-004 | OTTHUMT00000041252.1 | 1554 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| COL12A1-005 | OTTHUMT00000041253.1 | 499 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
