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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments (3)
- Orthologues (6)
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
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- Ensembl

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Gene: SMC1A OTTHUMG00000021614

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Description

structural maintenance of chromosomes 1A

Synonyms

Smcb, SB1.8, KIAA0178, DXS423E

Location

Chromosome X: 53,374,149-53,422,728 reverse strand.

VEGA68:CM000685.2

About this gene

This gene has 5 transcripts (splice variants), 6 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SMC1A-001	OTTHUMT00000056756.3	9784	1233aa	OTTHUMP00000023351	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14352	Q14683
SMC1A-003	OTTHUMT00000056758.4	868	262aa	OTTHUMP00000023352	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0Y7K8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SMC1A-005	OTTHUMT00000056760.3	838	279aa	OTTHUMP00000274262	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	V9GY57	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
SMC1A-002	OTTHUMT00000056757.2	880	54aa	OTTHUMP00000274263	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	V9GYN9
SMC1A-004	OTTHUMT00000056759.1	847	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

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Summary

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Gene-based displays