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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
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Gene: SPN OTTHUMG00000097765

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Description

sialophorin

Synonyms

LSN, CD43, GPL115

Location

Chromosome 16: 29,662,979-29,670,876 forward strand.

VEGA68:CM000678.2

About this gene

This gene has 4 transcripts (splice variants) and 5 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SPN-001	OTTHUMT00000215001.2	1935	400aa	OTTHUMP00000123397	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS10650	P16150
SPN-002	OTTHUMT00000316840.1	1197	355aa	OTTHUMP00000196610	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JUK7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SPN-003	OTTHUMT00000433675.2	1853	400aa	OTTHUMP00000255064	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS10650	P16150
SPN-004	OTTHUMT00000435670.1	2077	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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