Description
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)
Synonyms
HHS, GalNAc-T3, HFTC
Location
Chromosome 2: 165,747,591-165,794,682 reverse strand.
VEGA68:CM000664.2
About this gene
This gene has 10 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| GALNT3-001 | OTTHUMT00000255205.2 | 3868 | 633aa | OTTHUMP00000163020 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2226 | Q14435 | |
| GALNT3-010 | OTTHUMT00000333603.1 | 2107 | 371aa | OTTHUMP00000204919 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| GALNT3-004 | OTTHUMT00000333597.8 | 1954 | 464aa | OTTHUMP00000204915 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9J2C3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GALNT3-006 | OTTHUMT00000333599.3 | 570 | 11aa | OTTHUMP00000204917 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GALNT3-002 | OTTHUMT00000333595.3 | 559 | 57aa | OTTHUMP00000204913 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JXX2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GALNT3-005 | OTTHUMT00000333598.3 | 540 | 90aa | OTTHUMP00000204916 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9J388 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GALNT3-003 | OTTHUMT00000333596.3 | 536 | 25aa | OTTHUMP00000204914 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GALNT3-009 | OTTHUMT00000333602.1 | 1424 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| GALNT3-007 | OTTHUMT00000333600.1 | 799 | 89aa | OTTHUMP00000204918 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| GALNT3-008 | OTTHUMT00000333601.1 | 603 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
