Description
protein tyrosine phosphatase, receptor type, O
Synonyms
GLEPP1, PTPU2, PTP-U2, PTP-oc, NPHS6
Location
Chromosome 12: 15,322,397-15,597,399 forward strand.
VEGA68:CM000674.2
About this gene
This gene has 12 transcripts (splice variants), 24 orthologues and 21 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PTPRO-001 | OTTHUMT00000401079.1 | 5301 | 1216aa | OTTHUMP00000239456 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8675 | Q16827 | |
| PTPRO-002 | OTTHUMT00000401081.1 | 5061 | 1188aa | OTTHUMP00000239458 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8674 | - | |
| PTPRO-006 | OTTHUMT00000401085.1 | 4062 | 405aa | OTTHUMP00000239461 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44837 | A0A024RAS9 | |
| PTPRO-007 | OTTHUMT00000401086.1 | 3978 | 377aa | OTTHUMP00000239462 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS53754 | A0A024RAS0 | |
| PTPRO-004 | OTTHUMT00000401083.1 | 3030 | 405aa | OTTHUMP00000239459 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44837 | A0A024RAS9 | |
| PTPRO-005 | OTTHUMT00000401084.1 | 2946 | 377aa | OTTHUMP00000239460 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS53754 | A0A024RAS0 | |
| PTPRO-003 | OTTHUMT00000401080.1 | 2070 | 597aa | OTTHUMP00000239457 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| PTPRO-012 | OTTHUMT00000401089.1 | 472 | 116aa | OTTHUMP00000239464 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YH60 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PTPRO-011 | OTTHUMT00000401087.1 | 533 | 88aa | OTTHUMP00000239463 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PTPRO-010 | OTTHUMT00000401090.1 | 905 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PTPRO-008 | OTTHUMT00000401082.1 | 512 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PTPRO-009 | OTTHUMT00000401088.1 | 580 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
