Transcript: SLC22A1-007 OTTHUMT00000400155.2

Description

solute carrier family 22 (organic cation transporter), member 1

Location

About this transcript

This transcript has 9 exons and is annotated with 19 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SLC22A1-001	OTTHUMT00000042938.2	1948	554aa	OTTHUMP00000017537	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5274	O15245
SLC22A1-006	OTTHUMT00000400154.2	1521	506aa	OTTHUMP00000238993	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5275	-
SLC22A1-007	OTTHUMT00000400155.2	1452	483aa	OTTHUMP00000238994	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
SLC22A1-005	OTTHUMT00000400156.2	653	48aa	OTTHUMP00000238995	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SLC22A1-004	OTTHUMT00000400153.1	1598	140aa	OTTHUMP00000238992	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F5H5P3
SLC22A1-002	OTTHUMT00000042939.2	1484	353aa	OTTHUMP00000238949	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SLC22A1-003	OTTHUMT00000042940.1	324	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 1,452 bps Translation length: 483 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 09/11/2010)

Alternative symbols

RP11-288H12.1-007

Other assemblies

This transcript maps to 160,121,936-160,158,582 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000457470

Curation Method

Manual annotation from Havana