Transcript: BRCA2-005 OTTHUMT00000387478.1

Description

breast cancer 2, early onset

Location

About this transcript

This transcript has 4 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
BRCA2-001	OTTHUMT00000046000.3	11986	3418aa	OTTHUMP00000018803	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9344	-
BRCA2-002	OTTHUMT00000046001.2	842	186aa	OTTHUMP00000231724	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YE37	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
BRCA2-005	OTTHUMT00000387478.1	495	64aa	OTTHUMP00000231723	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
BRCA2-004	OTTHUMT00000387477.1	7950	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
BRCA2-003	OTTHUMT00000387476.3	2011	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
BRCA2-006	OTTHUMT00000387479.1	523	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 495 bps Translation length: 64 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 14/06/2010)

Alternative symbols

RP11-298P3.3-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 32,370,971-32,379,495 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000528762

Curation Method

Manual annotation from Havana