Transcript: PSAP-001 OTTHUMT00000048553.2

Description

prosaposin

Location

About this transcript

This transcript has 14 exons and is annotated with 50 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PSAP-001	OTTHUMT00000048553.2	2872	524aa	OTTHUMP00000019776	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS7311	A0A024QZQ2
PSAP-005	OTTHUMT00000487869.2	500	167aa	OTTHUMP00000281057	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0J9YXB8	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
PSAP-002	OTTHUMT00000048554.4	1681	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
PSAP-003	OTTHUMT00000048555.1	576	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PSAP-004	OTTHUMT00000048556.1	344	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 14 Transcript length: 2,872 bps Translation length: 524 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS7311

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/01/2015 (Created on 08/12/2003)

Alternative symbols

RP11-472K8.1-001

Other assemblies

This transcript maps to 71,816,298-71,851,375 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000394936

Curation Method

Manual annotation from Havana