Transcript: SMC1A-005 OTTHUMT00000056760.3

Description

structural maintenance of chromosomes 1A

Location

About this transcript

This transcript has 6 exons and is annotated with 13 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SMC1A-001	OTTHUMT00000056756.3	9784	1233aa	OTTHUMP00000023351	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14352	Q14683
SMC1A-003	OTTHUMT00000056758.4	868	262aa	OTTHUMP00000023352	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0Y7K8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SMC1A-005	OTTHUMT00000056760.3	838	279aa	OTTHUMP00000274262	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	V9GY57	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
SMC1A-002	OTTHUMT00000056757.2	880	54aa	OTTHUMP00000274263	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	V9GYN9
SMC1A-004	OTTHUMT00000056759.1	847	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 6 Transcript length: 838 bps Translation length: 279 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 09/07/2015 (Created on 04/09/2003)

Alternative symbols

RP6-29D12.1-005

Remarks

SMC1 structural maintenance of chromosomes 1-like 1 (yeast)

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 53,380,620-53,396,378 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000470241

Curation Method

Manual annotation from Havana