Transcript: SETD3-006 OTTHUMT00000134349.1

Description

SET domain containing 3

Location

Chromosome 14: 99,398,732-99,413,250 reverse strand.

About this transcript

This transcript has 3 exons.

Gene

This transcript is a product of gene OTTHUMG00000028970 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
SETD3-001	OTTHUMT00000072339.3	2878	594aa	OTTHUMP00000067230	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9951	A0A024R6K3
SETD3-003	OTTHUMT00000072341.2	1330	296aa	OTTHUMP00000067231	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9952	-
SETD3-002	OTTHUMT00000072337.2	2592	292aa	OTTHUMP00000028053	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q6NXR6
SETD3-004	OTTHUMT00000072338.4	2191	81aa	OTTHUMP00000197240	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SETD3-005	OTTHUMT00000134348.3	1754	81aa	OTTHUMP00000197241	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SETD3-008	OTTHUMT00000316406.2	973	81aa	OTTHUMP00000197243	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SETD3-007	OTTHUMT00000316405.3	545	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SETD3-006	OTTHUMT00000134349.1	855	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 855 bps

Class

retained intron [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 13/01/2005)

Alternative symbols

AL132819.1-006

Other assemblies

This transcript maps to 99,398,732-99,413,250 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000489770

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SETD3-006 OTTHUMT00000134349.1

Summary

Transcript-based displays