Transcript: COL6A2-001 OTTHUMT00000206971.1

Description

collagen, type VI, alpha 2

Location

About this transcript

This transcript has 28 exons and is annotated with 32 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
COL6A2-001	OTTHUMT00000206971.1	3461	1019aa	OTTHUMP00000115568	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13728	P12110
COL6A2-003	OTTHUMT00000206973.3	3430	828aa	OTTHUMP00000115570	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13730	-
COL6A2-002	OTTHUMT00000206972.2	3101	918aa	OTTHUMP00000115569	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13729	-
COL6A2-004	OTTHUMT00000206974.2	919	180aa	OTTHUMP00000115571	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
COL6A2-005	OTTHUMT00000206975.2	750	250aa	OTTHUMP00000115572	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
COL6A2-006	OTTHUMT00000206976.1	306	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
COL6A2-007	OTTHUMT00000206977.1	777	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 28 Transcript length: 3,461 bps Translation length: 1,019 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS13728

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 14/09/2005)

Alternative symbols

AP001101.5-001

Remarks

NP_001840

Other assemblies

This transcript maps to 46,098,097-46,132,849 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000300527

Curation Method

Manual annotation from Havana