Description
transcription factor 25 (basic helix-loop-helix)
Location
Chromosome 16: 89,873,612-89,911,384 forward strand.
About this transcript
This transcript has 18 exons and is annotated with 7 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000138986 Show transcript tableHide transcript table
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
TCF25-001 | OTTHUMT00000272875.3 | 2233 | 676aa | OTTHUMP00000176847 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10987 | Q9BQ70 | |
TCF25-027 | OTTHUMT00000474506.1 | 2047 | 216aa | OTTHUMP00000275019 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
TCF25-004 | OTTHUMT00000421855.1 | 1879 | 570aa | OTTHUMP00000249986 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
TCF25-016 | OTTHUMT00000421856.2 | 857 | 286aa | OTTHUMP00000249987 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
TCF25-014 | OTTHUMT00000421851.1 | 797 | 265aa | OTTHUMP00000249984 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
TCF25-012 | OTTHUMT00000421846.2 | 763 | 233aa | OTTHUMP00000249981 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
TCF25-011 | OTTHUMT00000421850.1 | 655 | 210aa | OTTHUMP00000249983 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
TCF25-023 | OTTHUMT00000421862.2 | 627 | 209aa | OTTHUMP00000249988 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
TCF25-025 | OTTHUMT00000421866.1 | 515 | 117aa | OTTHUMP00000249989 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
TCF25-013 | OTTHUMT00000421853.1 | 477 | 146aa | OTTHUMP00000249985 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
TCF25-006 | OTTHUMT00000421863.1 | 2589 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
TCF25-003 | OTTHUMT00000421847.1 | 1728 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
TCF25-028 | OTTHUMT00000491374.1 | 2688 | 676aa | OTTHUMP00000283154 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | CCDS10987 | - | |
TCF25-008 | OTTHUMT00000421849.1 | 860 | 76aa | OTTHUMP00000249982 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
TCF25-010 | OTTHUMT00000421852.1 | 561 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
TCF25-024 | OTTHUMT00000421868.1 | 459 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
TCF25-026 | OTTHUMT00000421869.1 | 437 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
TCF25-015 | OTTHUMT00000421854.1 | 383 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
TCF25-009 | OTTHUMT00000421848.1 | 274 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
TCF25-005 | OTTHUMT00000421860.1 | 1947 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
TCF25-007 | OTTHUMT00000421867.1 | 1535 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
TCF25-002 | OTTHUMT00000421845.1 | 981 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
TCF25-018 | OTTHUMT00000421859.1 | 721 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
TCF25-017 | OTTHUMT00000421858.1 | 634 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
TCF25-021 | OTTHUMT00000421864.1 | 468 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
TCF25-019 | OTTHUMT00000421861.1 | 373 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
TCF25-020 | OTTHUMT00000421857.1 | 263 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |