Transcript: CCDC116-001 OTTHUMT00000320199.1

Description

coiled-coil domain containing 116

Location

Chromosome 22: 21,632,729-21,637,327 forward strand.

About this transcript

This transcript has 5 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000150821 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
CCDC116-001	OTTHUMT00000320199.1	2260	613aa	OTTHUMP00000198555	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13791
CCDC116-003	OTTHUMT00000472374.1	1913	526aa	OTTHUMP00000274259	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-
CCDC116-002	OTTHUMT00000320200.2	572	152aa	OTTHUMP00000198556	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Summary

Statistics

Exons: 5 Transcript length: 2,260 bps Translation length: 613 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS13791

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 12/10/2007)

Alternative symbols

KB-1440D3.10-001

Remarks

There is a deletion in what would be the 3rd coding exon of the cDNAEm:AK093365.1, which means that it cannot be used as evidence. This would have supported the main SwissProt variant (SW:Q8IYX3.2) of 515 amino acids, so we just have this 613 amino acid variant

Other assemblies

This transcript maps to 21,632,729-21,637,327 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000292779

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: CCDC116-001 OTTHUMT00000320199.1

Summary

Transcript-based displays