Transcript: ALK-005 OTTHUMT00000491147.1

Description

anaplastic lymphoma receptor tyrosine kinase

Location

About this transcript

This transcript has 14 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ALK-001	OTTHUMT00000324994.1	6220	1620aa	OTTHUMP00000201048	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33172	Q9UM73
ALK-002	OTTHUMT00000324995.1	577	152aa	OTTHUMP00000201049	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7BZ33	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ALK-005	OTTHUMT00000491147.1	2520	129aa	OTTHUMP00000282964	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ALK-004	OTTHUMT00000491148.1	1757	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ALK-003	OTTHUMT00000324996.1	560	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 14 Transcript length: 2,520 bps Translation length: 129 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 05/04/2016 (Created on 05/04/2016)

Alternative symbols

AC106870.4-005

Annotation Attributes

RNA-Seq supported only [Definitions]

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 29,192,794-29,227,653 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000431873

Curation Method

Manual annotation from Havana