Transcript: SYN2-006 OTTHUMT00000339723.2

Description

synapsin II

Location

About this transcript

This transcript has 7 exons and is annotated with 9 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SYN2-002	OTTHUMT00000339528.5	3871	478aa	OTTHUMP00000275822	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS74901	A0A087X2E3
SYN2-001	OTTHUMT00000339526.9	2674	582aa	OTTHUMP00000275821	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS74900	A0A087WW96
SYN2-006	OTTHUMT00000339723.2	2356	221aa	OTTHUMP00000275823	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A087WW91	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SYN2-004	OTTHUMT00000339677.2	550	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SYN2-007	OTTHUMT00000339724.2	520	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SYN2-005	OTTHUMT00000339678.2	2128	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 2,356 bps Translation length: 221 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 05/03/2014 (Created on 29/10/2008)

Alternative symbols

AC091492.1-006

Annotation Attributes

not organism-supported [Definitions]

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 12,161,545-12,185,377 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000425297

Curation Method

Manual annotation from Havana