Transcript: COLQ-002 OTTHUMT00000343576.1

Description

collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase

Location

Chromosome 3: 15,451,473-15,521,751 reverse strand.

About this transcript

This transcript has 17 exons and is annotated with 10 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000156233 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
COLQ-001	OTTHUMT00000343575.2	3005	455aa	OTTHUMP00000209564	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33709	Q9Y215
COLQ-003	OTTHUMT00000343577.1	2784	445aa	OTTHUMP00000209566	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS46768	-
COLQ-007	OTTHUMT00000346318.1	1482	421aa	OTTHUMP00000210839	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS43057	-
COLQ-002	OTTHUMT00000343576.1	1668	456aa	OTTHUMP00000209565	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q9Y215
COLQ-004	OTTHUMT00000343578.2	582	194aa	OTTHUMP00000209567	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
COLQ-008	OTTHUMT00000467399.1	550	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
COLQ-005	OTTHUMT00000345418.1	283	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
COLQ-006	OTTHUMT00000345419.1	721	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 17 Transcript length: 1,668 bps Translation length: 456 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 12/12/2008)

Alternative symbols

RP11-584M7.1-002

Remarks

GENCODE experimental pipeline

non canonical other

The majority of supporting mRNAs are from a patient with CMS syndrome so the non-canonical splicing between exons 15 and 16 is likely to be disease specific

Other assemblies

This transcript maps to 15,451,473-15,521,751 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000603808

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: COLQ-002 OTTHUMT00000343576.1

Summary

Transcript-based displays