Transcript: LRWD1-004 OTTHUMT00000349496.2

Description

leucine-rich repeats and WD repeat domain containing 1

Location

Chromosome 7: 102,464,956-102,468,377 forward strand.

About this transcript

This transcript has 7 exons and is annotated with 2 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000157718 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LRWD1-001	OTTHUMT00000349493.1	2215	647aa	OTTHUMP00000212406	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34715	Q9UFC0
LRWD1-004	OTTHUMT00000349496.2	1062	154aa	OTTHUMP00000212408	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
LRWD1-009	OTTHUMT00000349501.1	847	242aa	OTTHUMP00000212412	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LRWD1-007	OTTHUMT00000349499.2	908	179aa	OTTHUMP00000212410	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LRWD1-005	OTTHUMT00000349497.1	703	41aa	OTTHUMP00000212409	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LRWD1-003	OTTHUMT00000349495.1	646	45aa	OTTHUMP00000212407	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
LRWD1-002	OTTHUMT00000349494.2	5491	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
LRWD1-006	OTTHUMT00000349498.1	552	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 1,062 bps Translation length: 154 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 13/03/2009)

Alternative symbols

RP11-514P8.4-004

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 102,464,956-102,468,377 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000463739

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: LRWD1-004 OTTHUMT00000349496.2

Summary

Transcript-based displays