Transcript: HMCES-005 OTTHUMT00000355474.2

Description

5-hydroxymethylcytosine (hmC) binding, ES cell-specific

Location

Chromosome 3: 129,278,828-129,304,751 forward strand.

About this transcript

This transcript has 6 exons and is annotated with 9 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000159452 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
HMCES-001	OTTHUMT00000355470.2	2515	354aa	OTTHUMP00000215384	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33852	Q96FZ2
HMCES-003	OTTHUMT00000355472.2	1952	354aa	OTTHUMP00000215386	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33852	Q96FZ2
HMCES-002	OTTHUMT00000355471.1	1763	354aa	OTTHUMP00000215385	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33852	Q96FZ2
HMCES-004	OTTHUMT00000355473.2	1490	312aa	OTTHUMP00000215387	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
HMCES-005	OTTHUMT00000355474.2	948	282aa	OTTHUMP00000215388	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HMCES-009	OTTHUMT00000355478.3	774	233aa	OTTHUMP00000215392	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HMCES-007	OTTHUMT00000355476.3	643	140aa	OTTHUMP00000215390	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HMCES-006	OTTHUMT00000355475.2	599	183aa	OTTHUMP00000215389	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Summary

Statistics

Exons: 6 Transcript length: 948 bps Translation length: 282 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 05/06/2009)

Alternative symbols

RP13-685P2.2-005

Remarks

GENCODE experimental pipeline

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 129,278,828-129,304,751 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000509042

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: HMCES-005 OTTHUMT00000355474.2

Summary

Transcript-based displays