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Description

vacuolar protein sorting 53 homolog (S. cerevisiae)

Location
About this transcript

This transcript has 20 exons and is annotated with 6 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
VPS53-001OTTHUMT00000436930.513106832aaOTTHUMP00000256667
 
Protein coding
CCDS45558-
VPS53-002OTTHUMT00000436931.22656670aaOTTHUMP00000256668
 
Protein coding
CCDS10995-
VPS53-006OTTHUMT00000436940.22356699aaOTTHUMP00000256674
 
Protein coding
-Q5VIR6
VPS53-003OTTHUMT00000436932.21269422aaOTTHUMP00000256669
 
Protein coding
--
VPS53-019OTTHUMT00000437045.1729237aaOTTHUMP00000256719
 
Protein coding
--CDS 5' incomplete
VPS53-011OTTHUMT00000437006.261368aaOTTHUMP00000256702
 
Protein coding
--CDS 3' incomplete
VPS53-020OTTHUMT00000437095.1585145aaOTTHUMP00000256748
 
Protein coding
--
VPS53-008OTTHUMT00000437003.12641No protein-
 
Artifact
--
VPS53-007OTTHUMT00000436998.12477No protein-
 
Artifact
--
VPS53-005OTTHUMT00000436939.13204216aaOTTHUMP00000256673
 
Nonsense mediated decay
--
VPS53-004OTTHUMT00000436941.11903547aaOTTHUMP00000256675
 
Nonsense mediated decay
--
VPS53-009OTTHUMT00000437004.12444No protein-
 
Processed transcript
--
VPS53-021OTTHUMT00000437097.1744No protein-
 
Processed transcript
--
VPS53-015OTTHUMT00000437016.1575No protein-
 
Processed transcript
--
VPS53-012OTTHUMT00000437007.1570No protein-
 
Processed transcript
--
VPS53-013OTTHUMT00000437015.1561No protein-
 
Processed transcript
--
VPS53-017OTTHUMT00000437018.1494No protein-
 
Processed transcript
--
VPS53-010OTTHUMT00000437005.12781No protein-
 
Retained intron
--
VPS53-022OTTHUMT00000437096.11972No protein-
 
Retained intron
--
VPS53-016OTTHUMT00000437014.1732No protein-
 
Retained intron
--
VPS53-014OTTHUMT00000437017.1683No protein-
 
Retained intron
--
VPS53-018OTTHUMT00000437035.1366No protein-
 
Retained intron
--
Statistics

Exons: 20 Transcript length: 3,204 bps Translation length: 216 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 19/10/2011)

Alternative symbols

RP5-1029F21.1-005

Other assemblies

This transcript maps to 531,968-714,856 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays