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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments (1)
- Orthologues (21)
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

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Gene: Otx1 OTTMUSG00000005253

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Description

orthodenticle homolog 1 (Drosophila)

Location

Chromosome 11: 21,994,764-22,002,897 reverse strand.

About this gene

This gene has 3 transcripts (splice variants), 21 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Otx1-001	OTTMUST00000011716.2	2789	355aa	OTTMUSP00000005430	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS24468	Q5SS54
Otx1-003	OTTMUST00000097084.2	771	150aa	OTTMUSP00000054367	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	G3V000	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Otx1-002	OTTMUST00000011717.2	5273	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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Gene-based displays