Description
protocadherin 19
Location
Chromosome X: 133,582,860-133,688,987 reverse strand.
About this gene
This gene has 6 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Pcdh19-001 | OTTMUST00000044950.2 | 10289 | 1145aa | OTTMUSP00000020199 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS41117 | Q80TF3 | |
| Pcdh19-004 | OTTMUST00000129109.1 | 8407 | 1097aa | OTTMUSP00000069395 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS53181 | E9Q5E1 | |
| Pcdh19-002 | OTTMUST00000044951.2 | 7035 | 641aa | OTTMUSP00000020200 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A2AGW4 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Pcdh19-003 | OTTMUST00000129111.1 | 3319 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| Pcdh19-006 | OTTMUST00000129110.1 | 335 | 7aa | OTTMUSP00000069396 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Pcdh19-005 | OTTMUST00000129112.1 | 405 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - |
