Description
lysine (K)-specific demethylase 5A
Location
Chromosome 6: 120,364,124-120,444,574 forward strand.
About this gene
This gene has 10 transcripts (splice variants), 6 orthologues and 3 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Kdm5a-001 | OTTMUST00000058459.2 | 10944 | 1690aa | OTTMUSP00000028321 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS51889 | Q3UXZ9 | |
| Kdm5a-009 | OTTMUST00000140168.2 | 460 | 153aa | OTTMUSP00000073505 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0N4SUK6 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| Kdm5a-010 | OTTMUST00000140169.1 | 1867 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| Kdm5a-003 | OTTMUST00000058625.2 | 3665 | 814aa | OTTMUSP00000073503 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0N4SVA7 | |
| Kdm5a-004 | OTTMUST00000058626.2 | 3329 | 621aa | OTTMUSP00000073504 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | Q921T5 | |
| Kdm5a-008 | OTTMUST00000058630.1 | 1295 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Kdm5a-005 | OTTMUST00000058627.1 | 2716 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Kdm5a-002 | OTTMUST00000058460.2 | 1402 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Kdm5a-006 | OTTMUST00000058628.1 | 999 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Kdm5a-007 | OTTMUST00000058629.1 | 689 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
