Description
leucine rich repeat containing 40
Location
Chromosome 3: 158,036,662-158,068,487 forward strand.
About this gene
This gene has 8 transcripts (splice variants), 17 orthologues and 15 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Lrrc40-001 | OTTMUST00000079197.2 | 4142 | 602aa | OTTMUSP00000042209 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS17935 | A0A0R4J0W6 | |
| Lrrc40-002 | OTTMUST00000079198.1 | 2701 | 131aa | OTTMUSP00000042210 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Lrrc40-003 | OTTMUST00000079199.1 | 2450 | 54aa | OTTMUSP00000042211 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Lrrc40-005 | OTTMUST00000079201.2 | 732 | 114aa | OTTMUSP00000042212 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Lrrc40-006 | OTTMUST00000079202.1 | 569 | 68aa | OTTMUSP00000042213 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Lrrc40-007 | OTTMUST00000132101.2 | 381 | 54aa | OTTMUSP00000070643 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Lrrc40-004 | OTTMUST00000079200.1 | 1069 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Lrrc40-008 | OTTMUST00000132102.1 | 421 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
