Description
nischarin
Location
Chromosome 14: 31,170,930-31,216,946 reverse strand.
About this gene
This gene has 24 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Nisch-004 | OTTMUST00000091988.3 | 5559 | 1593aa | OTTMUSP00000050743 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS36853 | Q80TM9 | |
| Nisch-005 | OTTMUST00000091987.1 | 4990 | 1348aa | OTTMUSP00000050742 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Nisch-001 | OTTMUST00000091969.4 | 2780 | 516aa | OTTMUSP00000050728 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Nisch-002 | OTTMUST00000091989.1 | 2415 | 472aa | OTTMUSP00000050744 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Nisch-007 | OTTMUST00000091992.1 | 1763 | 153aa | OTTMUSP00000050746 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Nisch-022 | OTTMUST00000092119.2 | 1206 | 226aa | OTTMUSP00000050839 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PZT1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Nisch-017 | OTTMUST00000092128.1 | 1204 | 333aa | OTTMUSP00000050844 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F6YR29 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Nisch-024 | OTTMUST00000092129.1 | 856 | 166aa | OTTMUSP00000050845 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F7AFP3 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Nisch-010 | OTTMUST00000092017.2 | 747 | 249aa | OTTMUSP00000050762 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F6PY46 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| Nisch-016 | OTTMUST00000092117.2 | 725 | 242aa | OTTMUSP00000050837 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F7AN84 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| Nisch-020 | OTTMUST00000092118.2 | 689 | 230aa | OTTMUSP00000050838 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F6UKP3 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| Nisch-013 | OTTMUST00000092013.1 | 589 | 149aa | OTTMUSP00000050760 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F6ZL69 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Nisch-003 | OTTMUST00000091970.2 | 5098 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| Nisch-006 | OTTMUST00000091990.1 | 2276 | 334aa | OTTMUSP00000050745 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Nisch-015 | OTTMUST00000092014.1 | 761 | 45aa | OTTMUSP00000050761 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F6ZL22 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Nisch-021 | OTTMUST00000092121.1 | 683 | 58aa | OTTMUSP00000050840 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F7AVB2 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Nisch-008 | OTTMUST00000091991.1 | 3716 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Nisch-012 | OTTMUST00000092018.1 | 918 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Nisch-009 | OTTMUST00000092015.1 | 736 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Nisch-014 | OTTMUST00000092016.1 | 632 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Nisch-018 | OTTMUST00000092122.1 | 493 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Nisch-019 | OTTMUST00000092120.1 | 431 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Nisch-023 | OTTMUST00000092126.1 | 389 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Nisch-011 | OTTMUST00000092019.1 | 645 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
