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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
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Gene: Alx1 OTTMUSG00000036202

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Description

ALX homeobox 1

Location

Chromosome 10: 102,998,707-103,030,215 reverse strand.

About this gene

This gene has 7 transcripts (splice variants), 21 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Alx1-001	OTTMUST00000093010.4	2689	326aa	OTTMUSP00000051519	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS24155	Q8C8B0
Alx1-003	OTTMUST00000158683.1	2012	326aa	OTTMUSP00000082480	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS24155	-
Alx1-004	OTTMUST00000158682.1	1695	326aa	OTTMUSP00000082479	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS24155	-
Alx1-006	OTTMUST00000158680.1	1542	377aa	OTTMUSP00000082477	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Alx1-005	OTTMUST00000158681.1	1702	255aa	OTTMUSP00000082478	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Alx1-002	OTTMUST00000093011.2	1613	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Alx1-007	OTTMUST00000158684.1	2284	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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