Description
synuclein, alpha interacting protein (synphilin)
Location
Chromosome 18: 52,767,709-52,915,935 forward strand.
About this gene
This gene has 12 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Sncaip-001 | OTTMUST00000111559.1 | 3724 | 965aa | OTTMUSP00000062485 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS57124 | G5E848 | |
| Sncaip-003 | OTTMUST00000111560.1 | 3632 | 965aa | OTTMUSP00000062486 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS57124 | G5E848 | |
| Sncaip-005 | OTTMUST00000111562.1 | 3433 | 915aa | OTTMUSP00000062488 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS37820 | - | |
| Sncaip-004 | OTTMUST00000111561.1 | 3272 | 915aa | OTTMUSP00000062487 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS37820 | - | |
| Sncaip-002 | OTTMUST00000111558.1 | 3585 | 914aa | OTTMUSP00000062484 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Sncaip-011 | OTTMUST00000111568.2 | 2568 | 855aa | OTTMUSP00000062493 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Sncaip-010 | OTTMUST00000111569.1 | 1512 | 503aa | OTTMUSP00000062494 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Sncaip-012 | OTTMUST00000111564.2 | 404 | 10aa | OTTMUSP00000062489 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Sncaip-006 | OTTMUST00000111563.1 | 3256 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| Sncaip-007 | OTTMUST00000111566.1 | 2383 | 55aa | OTTMUSP00000062491 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Sncaip-009 | OTTMUST00000111567.1 | 2312 | 55aa | OTTMUSP00000062492 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Sncaip-008 | OTTMUST00000111565.1 | 1905 | 62aa | OTTMUSP00000062490 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - |
