Description
SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
Location
Chromosome 7: 118,131,308-118,243,670 reverse strand.
About this gene
This gene has 10 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Smg1-001 | OTTMUST00000111843.1 | 15557 | 3658aa | OTTMUSP00000062695 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS40102 | Q8BKX6 | |
| Smg1-002 | OTTMUST00000111846.3 | 1516 | 335aa | OTTMUSP00000062697 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Smg1-006 | OTTMUST00000111848.1 | 785 | 96aa | OTTMUSP00000062698 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Smg1-005 | OTTMUST00000111844.2 | 12147 | 59aa | OTTMUSP00000062696 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Smg1-010 | OTTMUST00000144699.1 | 447 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Smg1-004 | OTTMUST00000111847.1 | 3911 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Smg1-003 | OTTMUST00000111845.1 | 3630 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Smg1-007 | OTTMUST00000144702.1 | 2287 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Smg1-008 | OTTMUST00000144701.1 | 1534 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Smg1-009 | OTTMUST00000144700.1 | 1460 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
