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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
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Gene: Smg7 OTTMUSG00000049697

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Description

Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)

Location

Chromosome 1: 152,836,995-152,902,646 reverse strand.

About this gene

This gene has 6 transcripts (splice variants), 3 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Smg7-003	OTTMUST00000126592.1	5792	1146aa	OTTMUSP00000068435	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48394	-
Smg7-002	OTTMUST00000126591.1	5767	1134aa	OTTMUSP00000068434	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS35740	-
Smg7-001	OTTMUST00000126593.1	3928	1138aa	OTTMUSP00000068436	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48395	Q5RJH6
Smg7-005	OTTMUST00000126595.1	672	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Smg7-004	OTTMUST00000126594.1	574	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Smg7-006	OTTMUST00000126596.1	525	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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