Transcript: Col1a1-001 OTTMUST00000004184.1

Description

procollagen type I alpha 1

Location

About this transcript

This transcript has 51 exons and is annotated with 49 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Col1a1-001	OTTMUST00000004184.1	5930	1453aa	OTTMUSP00000002001	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS25265	P11087
Col1a1-004	OTTMUST00000072724.1	5246	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Col1a1-002	OTTMUST00000004185.1	337	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Col1a1-005	OTTMUST00000072725.1	493	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Col1a1-003	OTTMUST00000004186.2	363	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 51 Transcript length: 5,930 bps Translation length: 1,453 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS25265

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 01/07/2004)

Alternative symbols

RP23-112C19.9-001

Remarks

NP_031768

Other assemblies

This transcript maps to 94,936,224-94,953,042 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000001547

Curation Method

Manual annotation from Havana