Transcript: Ccm2-005 OTTMUST00000087555.2

Description

cerebral cavernous malformation 2 homolog (human)

Location

About this transcript

This transcript has 4 exons and is annotated with 3 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Ccm2-001	OTTMUST00000011466.2	1858	453aa	OTTMUSP00000005338	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS24422	Q8K2Y9
Ccm2-002	OTTMUST00000087553.1	1760	389aa	OTTMUSP00000047623	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48751	F7AVU1
Ccm2-006	OTTMUST00000087556.2	827	243aa	OTTMUSP00000047626	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E0CXR5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Ccm2-005	OTTMUST00000087555.2	431	113aa	OTTMUSP00000047625	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E0CZ84	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Ccm2-004	OTTMUST00000087554.1	691	126aa	OTTMUSP00000047624	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E0CYY2
Ccm2-003	OTTMUST00000011468.1	1182	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Ccm2-007	OTTMUST00000087557.1	815	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 431 bps Translation length: 113 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/07/2015 (Created on 28/04/2009)

Alternative symbols

RP23-169J19.3-005

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 6,546,910-6,589,474 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000159007

Curation Method

Manual annotation from Havana