Transcript: Sigmar1-002 OTTMUST00000015283.1

Description

sigma non-opioid intracellular receptor 1

Location

Chromosome 4: 41,738,493-41,741,359 reverse strand.

About this transcript

This transcript has 3 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000006675 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Sigmar1-001	OTTMUST00000015282.2	1640	223aa	OTTMUSP00000007061	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS18070	O55242
Sigmar1-002	OTTMUST00000015283.1	1547	192aa	OTTMUSP00000007062	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS71362	A2AMS0
Sigmar1-008	OTTMUST00000015289.1	1087	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Sigmar1-003	OTTMUST00000015284.1	845	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Sigmar1-004	OTTMUST00000015285.1	553	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Sigmar1-005	OTTMUST00000015286.1	468	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Sigmar1-007	OTTMUST00000015288.1	613	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Sigmar1-006	OTTMUST00000015287.1	335	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 1,547 bps Translation length: 192 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS71362

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 14/03/2012 (Created on 27/10/2004)

Alternative symbols

RP23-167I12.6-002

Other assemblies

This transcript maps to 41,738,493-41,741,359 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000071561

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Sigmar1-002 OTTMUST00000015283.1

Summary

Transcript-based displays