Transcript: Lepr-003 OTTMUST00000019185.4

Description

leptin receptor

Location

Chromosome 4: 101,717,404-101,815,352 forward strand.

About this transcript

This transcript has 20 exons.

Gene

This transcript is a product of gene OTTMUSG00000008454 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Lepr-004	OTTMUST00000019186.1	5542	894aa	OTTMUSP00000008797	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51239	Q3US58
Lepr-001	OTTMUST00000019183.1	4127	1162aa	OTTMUSP00000008794	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51240	P48356
Lepr-002	OTTMUST00000019184.1	3410	892aa	OTTMUSP00000008795	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS18397	Q3UNU8
Lepr-005	OTTMUST00000019187.2	208	30aa	OTTMUSP00000008798	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A2AV66	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Lepr-003	OTTMUST00000019185.4	4233	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Lepr-006	OTTMUST00000019188.1	889	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Lepr-007	OTTMUST00000019189.1	787	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Lepr-008	OTTMUST00000019190.1	415	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 20 Transcript length: 4,233 bps

Class

artifact [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 4, last modified on 28/02/2013 (Created on 15/02/2005)

Alternative symbols

RP23-31K16.2-003

Remarks

gdr reviewed this and found the 19th exon has artifactual splice donor and revised this variant from NMD to artifact; the rest of the exon-intron features are non-artifactual and they have been represented in other variant models. gdr 28/02/2013

non-canonical splicing between exons 19 and 20-by initial annotator

Other assemblies

This transcript maps to 101,717,404-101,815,352 in GRCm38 (Ensembl) coordinates.

Stable ID not present in Ensembl

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Lepr-003 OTTMUST00000019185.4

Summary

Transcript-based displays