Transcript: Pabpc4-005 OTTMUST00000048485.4

Description

poly A binding protein, cytoplasmic 4

Location

Chromosome 4: 123,282,845-123,298,822 forward strand.

About this transcript

This transcript has 15 exons and is annotated with 12 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000008978 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Pabpc4-001	OTTMUST00000020376.1	3019	660aa	OTTMUSP00000009342	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS18614	Q6PHQ9
Pabpc4-002	OTTMUST00000020377.1	2700	615aa	OTTMUSP00000009343	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS18615	Q91YZ8
Pabpc4-003	OTTMUST00000020378.1	3111	631aa	OTTMUSP00000009344	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A3KFU5
Pabpc4-004	OTTMUST00000020379.1	3050	644aa	OTTMUSP00000009345	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A3KFU8
Pabpc4-005	OTTMUST00000048485.4	3166	168aa	OTTMUSP00000065506	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	V9GXG3
Pabpc4-006	OTTMUST00000020381.1	692	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Pabpc4-008	OTTMUST00000020372.1	245	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Pabpc4-007	OTTMUST00000020382.2	1146	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 15 Transcript length: 3,166 bps Translation length: 168 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 4, last modified on 14/03/2013 (Created on 20/09/2006)

Alternative symbols

RP23-138L21.11-005

Other assemblies

This transcript maps to 123,282,845-123,298,822 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000183940

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Pabpc4-005 OTTMUST00000048485.4

Summary

Transcript-based displays