MouseVega Home
Description

procollagen type XVI alpha 1

About this transcript

This transcript has 4 exons and is annotated with 1 domain and feature.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Col16a1-001OTTMUST00000021751.252061580aaOTTMUSP00000009921
 
Protein coding
CCDS38889Q8BLX7
Col16a1-004OTTMUST00000021754.340371283aaOTTMUSP00000009924
 
Protein coding
-A3KFV7 CDS 5' incomplete
Col16a1-012OTTMUST00000021762.3452129aaOTTMUSP00000023722
 
Protein coding
-A3KFV6 CDS 3' incomplete
Col16a1-005OTTMUST00000021755.241022aaOTTMUSP00000009925
 
Protein coding
-A3KFV1 CDS 3' incomplete
Col16a1-006OTTMUST00000021756.238361aaOTTMUSP00000009926
 
Protein coding
-A3KFV2 CDS 3' incomplete
Col16a1-002OTTMUST00000021752.551381046aaOTTMUSP00000042281
 
Nonsense mediated decay
-E9Q0X4
Col16a1-003OTTMUST00000021753.54574No protein-
 
Processed transcript
--
Col16a1-009OTTMUST00000021759.23519No protein-
 
Processed transcript
--
Col16a1-013OTTMUST00000050688.1833No protein-
 
Processed transcript
--
Col16a1-011OTTMUST00000021761.4717No protein-
 
Processed transcript
--
Col16a1-008OTTMUST00000021758.1445No protein-
 
Processed transcript
--
Col16a1-010OTTMUST00000021760.2322No protein-
 
Processed transcript
--
Col16a1-007OTTMUST00000021757.1477No protein-
 
Retained intron
--
Statistics

Exons: 4 Transcript length: 383 bps Translation length: 61 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/07/2015 (Created on 18/03/2005)

Alternative symbols

RP23-12J1.1-006

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 130,047,945-130,051,851 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays