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Description

TAR DNA binding protein

About this transcript

This transcript has 4 exons and is annotated with 6 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Tardbp-001OTTMUST00000025673.17477414aaOTTMUSP00000011770
 
Protein coding
CCDS38971Q544R5
Tardbp-006OTTMUST00000025678.21904295aaOTTMUSP00000011774
 
Protein coding
CCDS38970Q8R0B4
Tardbp-012OTTMUST00000118267.21096298aaOTTMUSP00000066025
 
Protein coding
CCDS38969Q8BLD4
Tardbp-007OTTMUST00000025679.21011304aaOTTMUSP00000011775
 
Protein coding
CCDS38968Q6VYI4
Tardbp-003OTTMUST00000025675.3923302aaOTTMUSP00000011772
 
Protein coding
CCDS38967Q6VYI5
Tardbp-015OTTMUST00000118269.2818243aaOTTMUSP00000066027
 
Protein coding
-A0A087WR97 CDS 3' incomplete
Tardbp-025OTTMUST00000118283.181419aaOTTMUSP00000066036
 
Protein coding
-A0A087WQ63 CDS 5' incomplete
Tardbp-021OTTMUST00000118284.174885aaOTTMUSP00000066037
 
Protein coding
-A0A087WQX8 CDS 5' incomplete
Tardbp-014OTTMUST00000118270.2740149aaOTTMUSP00000066028
 
Protein coding
-A0A087WSE4 CDS 3' incomplete
Tardbp-016OTTMUST00000118285.1709200aaOTTMUSP00000066038
 
Protein coding
-A0A087WQA5 CDS 5' incomplete
Tardbp-019OTTMUST00000118282.1570128aaOTTMUSP00000066035
 
Protein coding
-A0A087WS74 CDS 5' incomplete
Tardbp-022OTTMUST00000118274.152999aaOTTMUSP00000066030
 
Protein coding
-A0A087WSC6 CDS 5' incomplete
Tardbp-008OTTMUST00000118266.12647No protein-
 
Artifact
--
Tardbp-010OTTMUST00000118265.11148No protein-
 
Artifact
--
Tardbp-002OTTMUST00000025674.32006298aaOTTMUSP00000031999
 
Nonsense mediated decay
CCDS38969Q8BLD4
Tardbp-024OTTMUST00000118272.11773298aaOTTMUSP00000066029
 
Nonsense mediated decay
CCDS38969Q8BLD4
Tardbp-011OTTMUST00000118268.1141184aaOTTMUSP00000066026
 
Nonsense mediated decay
-A0A087WP57
Tardbp-009OTTMUST00000118264.11304285aaOTTMUSP00000066024
 
Nonsense mediated decay
-A0A087WRZ5
Tardbp-005OTTMUST00000025677.3101135aaOTTMUSP00000066008
 
Nonsense mediated decay
-A0A087WQT4 CDS 5' incomplete
Tardbp-004OTTMUST00000025676.4781140aaOTTMUSP00000057922
 
Nonsense mediated decay
-H3BJV1 CDS 5' incomplete
Tardbp-017OTTMUST00000118279.1741175aaOTTMUSP00000066032
 
Nonsense mediated decay
-A0A087WSH7 CDS 5' incomplete
Tardbp-018OTTMUST00000118280.1684138aaOTTMUSP00000066033
 
Nonsense mediated decay
-A0A087WRP4 CDS 5' incomplete
Tardbp-023OTTMUST00000118275.167688aaOTTMUSP00000066031
 
Nonsense mediated decay
-A0A087WNY6 CDS 5' incomplete
Tardbp-020OTTMUST00000118281.151778aaOTTMUSP00000066034
 
Nonsense mediated decay
-A0A087WS17 CDS 5' incomplete
Tardbp-026OTTMUST00000118276.1908No protein-
 
Processed transcript
--
Tardbp-029OTTMUST00000118273.1731No protein-
 
Processed transcript
--
Tardbp-028OTTMUST00000118277.1629No protein-
 
Processed transcript
--
Tardbp-027OTTMUST00000118278.1358No protein-
 
Processed transcript
--
Tardbp-013OTTMUST00000118271.1370No protein-
 
Retained intron
--
Statistics

Exons: 4 Transcript length: 740 bps Translation length: 149 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/07/2015 (Created on 30/07/2013)

Alternative symbols

RP23-331P21.5-014

Annotation Attributes

not organism-supported [Definitions]

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 148,620,688-148,626,323 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays