Transcript: Agrn-002 OTTMUST00000025916.1

Description

agrin

Location

Chromosome 4: 156,165,290-156,169,086 reverse strand.

About this transcript

This transcript has 5 exons.

Gene

This transcript is a product of gene OTTMUSG00000011080 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Agrn-006	OTTMUST00000112089.1	6891	2034aa	OTTMUSP00000062908	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19060	M0QWP1
Agrn-004	OTTMUST00000025918.1	7262	1950aa	OTTMUSP00000011875	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A2ASQ1
Agrn-001	OTTMUST00000025915.1	7193	1927aa	OTTMUSP00000011873	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Z4YK85
Agrn-003	OTTMUST00000025917.1	4831	1151aa	OTTMUSP00000011874	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Z4YJS5
Agrn-007	OTTMUST00000112090.1	2893	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Agrn-005	OTTMUST00000025919.1	762	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Agrn-008	OTTMUST00000112088.1	8612	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Agrn-002	OTTMUST00000025916.1	2071	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 2,071 bps

Class

retained intron [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 27/03/2012 (Created on 03/05/2005)

Alternative symbols

RP23-139J18.2-002

Other assemblies

This transcript maps to 156,165,290-156,169,086 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000154494

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Agrn-002 OTTMUST00000025916.1

Summary

Transcript-based displays