Transcript: Srsf9-005 OTTMUST00000148389.1

Description

splicing factor arginine/serine rich 9

Location

About this transcript

This transcript has 6 exons and is annotated with 3 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Srsf9-001	OTTMUST00000034756.1	1162	222aa	OTTMUSP00000015554	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19587	Q9D0B0
Srsf9-004	OTTMUST00000034759.1	767	158aa	OTTMUSP00000015555	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6RTE1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Srsf9-005	OTTMUST00000148389.1	1392	62aa	OTTMUSP00000077146	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A1B0GS29	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Srsf9-006	OTTMUST00000148390.1	1237	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Srsf9-002	OTTMUST00000034757.1	901	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 6 Transcript length: 1,392 bps Translation length: 62 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 20/11/2015 (Created on 20/11/2015)

Alternative symbols

RP24-132L16.1-005

Annotation Attributes

RNA-Seq supported only [Definitions]

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 115,327,395-115,333,080 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000209604

Curation Method

Manual annotation from Havana