Transcript: Sema6d-001 OTTMUST00000036143.1

Description

sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D

Location

About this transcript

This transcript has 21 exons and is annotated with 20 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Sema6d-008	OTTMUST00000036150.1	6225	1073aa	OTTMUSP00000016242	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS16673	Q76KF0
Sema6d-001	OTTMUST00000036143.1	6157	998aa	OTTMUSP00000016237	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS16671	-
Sema6d-006	OTTMUST00000036148.1	4503	1011aa	OTTMUSP00000016240	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS16670	-
Sema6d-004	OTTMUST00000036146.1	4372	1069aa	OTTMUSP00000016238	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS71132	A2AW73
Sema6d-007	OTTMUST00000036149.2	3165	1054aa	OTTMUSP00000016241	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS16672	-
Sema6d-003	OTTMUST00000036145.1	746	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Sema6d-005	OTTMUST00000036147.2	4475	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Sema6d-002	OTTMUST00000036144.1	713	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 21 Transcript length: 6,157 bps Translation length: 998 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS16671

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 01/10/2013 (Created on 10/02/2006)

Alternative symbols

RP23-455E2.1-001

Other assemblies

This transcript maps to 124,089,969-124,667,769 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000103241

Curation Method

Manual annotation from Havana