Transcript: Vps39-001 OTTMUST00000036216.1

Description

vacuolar protein sorting 39 (yeast)

Location

Chromosome 2: 120,316,461-120,353,137 reverse strand.

About this transcript

This transcript has 26 exons and is annotated with 10 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000015284 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Vps39-001	OTTMUST00000036216.1	4384	886aa	OTTMUSP00000016272	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS38210	Q3USV9
Vps39-002	OTTMUST00000036217.1	4339	875aa	OTTMUSP00000016273	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS16619	Q5KU38
Vps39-003	OTTMUST00000036218.1	4055	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Vps39-006	OTTMUST00000036221.1	691	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Vps39-008	OTTMUST00000036223.1	602	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Vps39-007	OTTMUST00000036222.1	343	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Vps39-005	OTTMUST00000036220.1	3545	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Vps39-004	OTTMUST00000036219.1	3379	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Vps39-009	OTTMUST00000036224.1	469	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Vps39-010	OTTMUST00000036225.1	200	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 26 Transcript length: 4,384 bps Translation length: 886 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS38210

Class

protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 01/10/2013 (Created on 13/02/2006)

Alternative symbols

RP23-27L22.4-001

Remarks

B230107I06Rik

Other assemblies

This transcript maps to 120,316,461-120,353,137 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000102501

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: Vps39-001 OTTMUST00000036216.1

Summary

Transcript-based displays