Transcript: Pdss1-002 OTTMUST00000040190.2

Description

prenyl (solanesyl) diphosphate synthase subunit 1

Location

Chromosome 2: 22,895,595-22,916,213 forward strand.

About this transcript

This transcript has 7 exons and is annotated with 7 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000016619 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Pdss1-001	OTTMUST00000040189.2	1642	409aa	OTTMUSP00000044745	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS38057	Q33DR2
Pdss1-002	OTTMUST00000040190.2	1538	280aa	OTTMUSP00000044746	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q9CZQ1
Pdss1-004	OTTMUST00000083320.2	486	75aa	OTTMUSP00000044742	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Pdss1-007	OTTMUST00000083323.1	629	44aa	OTTMUSP00000044744	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Pdss1-005	OTTMUST00000083321.1	352	46aa	OTTMUSP00000044743	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Pdss1-006	OTTMUST00000083322.1	741	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Pdss1-003	OTTMUST00000083319.1	1950	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 1,538 bps Translation length: 280 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 01/10/2013 (Created on 04/04/2006)

Alternative symbols

RP23-436J19.1-002

Other assemblies

This transcript maps to 22,895,595-22,916,213 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000152170

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Pdss1-002 OTTMUST00000040190.2

Summary

Transcript-based displays