Transcript: Plxnd1-004 OTTMUST00000140353.1

Description

plexin D1

Location

About this transcript

This transcript has 3 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Plxnd1-001	OTTMUST00000050306.1	6907	1925aa	OTTMUSP00000023467	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20448	Q3UH93
Plxnd1-002	OTTMUST00000050307.2	700	233aa	OTTMUSP00000023468	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6T0L5	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Plxnd1-006	OTTMUST00000140352.1	869	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Plxnd1-004	OTTMUST00000140353.1	542	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Plxnd1-005	OTTMUST00000140354.1	442	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Plxnd1-003	OTTMUST00000050308.1	417	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 542 bps

Class

retained intron [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 14/04/2015 (Created on 14/04/2015)

Alternative symbols

RP23-223C23.1-004

Other assemblies

This transcript maps to 115,955,634-115,956,838 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000205003

Curation Method

Manual annotation from Havana