Description
procollagen type IV alpha 1
Location
Chromosome 8: 11,226,953-11,232,439 reverse strand.
About this transcript
This transcript has 4 exons.
Gene
This transcript is a product of gene OTTMUSG00000021316 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Col4a1-001 | OTTMUST00000050536.1 | 6615 | 1669aa | OTTMUSP00000023605 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS40219 | P02463 | |
| Col4a1-008 | OTTMUST00000148479.1 | 1170 | 328aa | OTTMUSP00000077175 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A1B0GRC0 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Col4a1-003 | OTTMUST00000146677.1 | 545 | 133aa | OTTMUSP00000076323 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A140LHU8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Col4a1-007 | OTTMUST00000148478.1 | 6487 | 1562aa | OTTMUSP00000077174 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A1B0GSI7 | |
| Col4a1-006 | OTTMUST00000148480.1 | 618 | 126aa | OTTMUSP00000077176 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Col4a1-005 | OTTMUST00000146676.1 | 416 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Col4a1-002 | OTTMUST00000050537.2 | 676 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Col4a1-004 | OTTMUST00000146678.1 | 604 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
