Transcript: Letm1-001 OTTMUST00000051047.2

Description

leucine zipper-EF-hand containing transmembrane protein 1

Location

About this transcript

This transcript has 14 exons and is annotated with 20 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Letm1-001	OTTMUST00000051047.2	5272	738aa	OTTMUSP00000023966	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19207	Q9Z2I0
Letm1-002	OTTMUST00000075323.2	2478	47aa	OTTMUSP00000072505	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0J9YTQ9
Letm1-006	OTTMUST00000137805.3	642	13aa	OTTMUSP00000072531	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0J9YV52	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Letm1-005	OTTMUST00000137806.1	747	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Letm1-004	OTTMUST00000075325.1	488	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Letm1-003	OTTMUST00000075324.1	3056	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 14 Transcript length: 5,272 bps Translation length: 738 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS19207

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 27/01/2015 (Created on 14/11/2006)

Alternative symbols

AC162898.1-001

Other assemblies

This transcript maps to 33,739,673-33,782,817 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000005431

Curation Method

Manual annotation from Havana