Transcript: Letm1-006 OTTMUST00000137805.3

Description

leucine zipper-EF-hand containing transmembrane protein 1

Location

About this transcript

This transcript has 4 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Letm1-001	OTTMUST00000051047.2	5272	738aa	OTTMUSP00000023966	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19207	Q9Z2I0
Letm1-002	OTTMUST00000075323.2	2478	47aa	OTTMUSP00000072505	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0J9YTQ9
Letm1-006	OTTMUST00000137805.3	642	13aa	OTTMUSP00000072531	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0J9YV52	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Letm1-005	OTTMUST00000137806.1	747	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Letm1-004	OTTMUST00000075325.1	488	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Letm1-003	OTTMUST00000075324.1	3056	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 642 bps Translation length: 13 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 19/08/2015 (Created on 09/01/2015)

Alternative symbols

AC162898.1-006

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 33,761,712-33,778,644 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000200827

Curation Method

Manual annotation from Havana