Transcript: Col4a3-002 OTTMUST00000051475.2

Description

procollagen type IV alpha 3

Location

About this transcript

This transcript has 4 exons and is annotated with 7 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Col4a3-001	OTTMUST00000051474.1	8554	1669aa	OTTMUSP00000024235	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS35631	Q9QZS0
Col4a3-003	OTTMUST00000051476.1	627	197aa	OTTMUSP00000024236	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6RIS8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Col4a3-002	OTTMUST00000051475.2	524	61aa	OTTMUSP00000062993	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	M0QWQ2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Col4a3-004	OTTMUST00000051477.1	1926	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 524 bps Translation length: 61 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 26/04/2012 (Created on 22/11/2006)

Alternative symbols

AC123746.1-002

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 82,715,304-82,718,884 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000125563

Curation Method

Manual annotation from Havana