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Description

TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)

Location
About this transcript

This transcript has 5 exons and is annotated with 6 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Trmt1-001OTTMUST00000052685.32567663aaOTTMUSP00000025015
 
Protein coding
CCDS40410A0A0R4IZW7
Trmt1-002OTTMUST00000052686.22138663aaOTTMUSP00000025016
 
Protein coding
CCDS40410A0A0R4IZW7
Trmt1-003OTTMUST00000052687.22044656aaOTTMUSP00000025017
 
Protein coding
CCDS52619E9PWD4
Trmt1-018OTTMUST00000098524.12114634aaOTTMUSP00000055385
 
Protein coding
-H3BKS8
Trmt1-007OTTMUST00000052691.4921260aaOTTMUSP00000055383
 
Protein coding
-H3BL70 CDS 3' incomplete
Trmt1-019OTTMUST00000098519.2902173aaOTTMUSP00000055382
 
Protein coding
-H3BKV3 CDS 3' incomplete
Trmt1-026OTTMUST00000098525.2840221aaOTTMUSP00000055386
 
Protein coding
-H3BK68 CDS 3' incomplete
Trmt1-004OTTMUST00000052688.3825242aaOTTMUSP00000025018
 
Protein coding
-D3Z413 CDS 3' incomplete
Trmt1-025OTTMUST00000098523.2817262aaOTTMUSP00000055384
 
Protein coding
-H3BKB8 CDS 3' incomplete
Trmt1-013OTTMUST00000052697.2638205aaOTTMUSP00000055375
 
Protein coding
-G3V019 CDS 5' incomplete
Trmt1-017OTTMUST00000098507.12020No protein-
 
Artifact
--
Trmt1-005OTTMUST00000052689.31104114aaOTTMUSP00000038916
 
Nonsense mediated decay
-D6RG86
Trmt1-010OTTMUST00000052694.2810103aaOTTMUSP00000038917
 
Nonsense mediated decay
-D6RFC0
Trmt1-029OTTMUST00000099373.150767aaOTTMUSP00000055787
 
Nonsense mediated decay
-H3BL74 CDS 5' incomplete
Trmt1-014OTTMUST00000052698.2904No protein-
 
Processed transcript
--
Trmt1-006OTTMUST00000052690.2895No protein-
 
Processed transcript
--
Trmt1-027OTTMUST00000098526.1864No protein-
 
Processed transcript
--
Trmt1-021OTTMUST00000098518.1502No protein-
 
Processed transcript
--
Trmt1-024OTTMUST00000098522.1421No protein-
 
Processed transcript
--
Trmt1-022OTTMUST00000098520.1384No protein-
 
Processed transcript
--
Trmt1-009OTTMUST00000052693.13647No protein-
 
Retained intron
--
Trmt1-020OTTMUST00000098517.11014No protein-
 
Retained intron
--
Trmt1-008OTTMUST00000052692.2980No protein-
 
Retained intron
--
Trmt1-011OTTMUST00000052695.2871No protein-
 
Retained intron
--
Trmt1-015OTTMUST00000052699.2846No protein-
 
Retained intron
--
Trmt1-012OTTMUST00000052696.2665No protein-
 
Retained intron
--
Trmt1-030OTTMUST00000099374.1502No protein-
 
Retained intron
--
Trmt1-016OTTMUST00000052700.1463No protein-
 
Retained intron
--
Trmt1-028OTTMUST00000098527.1462No protein-
 
Retained intron
--
Trmt1-023OTTMUST00000098521.1435No protein-
 
Retained intron
--
Trmt1-031OTTMUST00000099375.1339No protein-
 
Retained intron
--
Statistics

Exons: 5 Transcript length: 902 bps Translation length: 173 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/07/2015 (Created on 16/05/2011)

Alternative symbols

AC145556.1-019

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 84,686,339-84,691,322 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays