Transcript: Mbd4-005 OTTMUST00000139923.1

Description

methyl-CpG binding domain protein 4

Location

About this transcript

This transcript has 5 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Mbd4-001	OTTMUST00000056057.2	3614	554aa	OTTMUSP00000026896	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS39603	A0A0R4J0A8
Mbd4-003	OTTMUST00000056059.2	2415	386aa	OTTMUSP00000073395	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0N4SWA0
Mbd4-005	OTTMUST00000139923.1	669	175aa	OTTMUSP00000073396	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0N4SV30	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Mbd4-002	OTTMUST00000056058.2	2924	365aa	OTTMUSP00000047734	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	Q3TU27
Mbd4-004	OTTMUST00000056060.1	2064	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 5 Transcript length: 669 bps Translation length: 175 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 24/03/2015 (Created on 24/03/2015)

Alternative symbols

RP23-5D6.2-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 115,842,344-115,848,966 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000203643

Curation Method

Manual annotation from Havana