Description
tumor necrosis factor receptor superfamily, member 1a
Location
Chromosome 6: 125,349,362-125,350,035 forward strand.
About this transcript
This transcript has 2 exons.
Gene
This transcript is a product of gene OTTMUSG00000023806 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Tnfrsf1a-001 | OTTMUST00000058165.1 | 2156 | 454aa | OTTMUSP00000028139 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS20550 | Q3U479 | |
| Tnfrsf1a-006 | OTTMUST00000058194.2 | 885 | 295aa | OTTMUSP00000028163 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F7A4X5 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| Tnfrsf1a-003 | OTTMUST00000058191.2 | 390 | 65aa | OTTMUSP00000028161 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Tnfrsf1a-008 | OTTMUST00000139955.1 | 1962 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| Tnfrsf1a-002 | OTTMUST00000058190.1 | 920 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| Tnfrsf1a-004 | OTTMUST00000058192.3 | 621 | 107aa | OTTMUSP00000045442 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F6R6K0 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Tnfrsf1a-007 | OTTMUST00000084343.1 | 250 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Tnfrsf1a-005 | OTTMUST00000058193.2 | 764 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
