Transcript: Chd4-008 OTTMUST00000058446.3

Description

chromodomain helicase DNA binding protein 4

Location

Chromosome 6: 125,113,569-125,121,942 forward strand.

About this transcript

This transcript has 9 exons and is annotated with 15 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000023920 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Chd4-001	OTTMUST00000058439.1	6697	1915aa	OTTMUSP00000028311	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20543	Q6PDQ2
Chd4-002	OTTMUST00000058440.1	6652	1902aa	OTTMUSP00000028312	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9QAS4
Chd4-003	OTTMUST00000058441.1	6537	1922aa	OTTMUSP00000028313	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9QAS5
Chd4-008	OTTMUST00000058446.3	1332	444aa	OTTMUSP00000028315	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6WR45	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Chd4-004	OTTMUST00000058442.2	750	51aa	OTTMUSP00000028314	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Chd4-009	OTTMUST00000058447.1	1018	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Chd4-007	OTTMUST00000058445.2	821	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Chd4-006	OTTMUST00000058444.2	618	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Chd4-005	OTTMUST00000058443.1	369	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 1,332 bps Translation length: 444 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 10/07/2015 (Created on 20/03/2007)

Alternative symbols

RP23-436K10.1-008

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 125,113,569-125,121,942 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000124317

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Chd4-008 OTTMUST00000058446.3

Summary

Transcript-based displays