Transcript: Ercc4-004 OTTMUST00000059543.2

Description

excision repair cross-complementing rodent repair deficiency, complementation group 4

Location

About this transcript

This transcript has 10 exons and is annotated with 1 domain and feature.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Ercc4-001	OTTMUST00000059540.2	3480	917aa	OTTMUSP00000028967	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS37256	Q9QZD4
Ercc4-004	OTTMUST00000059543.2	5130	519aa	OTTMUSP00000028969	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F7A043	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Ercc4-003	OTTMUST00000059542.1	1455	393aa	OTTMUSP00000028968	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6RHP2
Ercc4-005	OTTMUST00000059544.1	651	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Ercc4-002	OTTMUST00000059541.2	1118	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 5,130 bps Translation length: 519 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/03/2012 (Created on 02/04/2007)

Alternative symbols

RP23-370K22.1-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 13,111,794-13,150,617 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000129049

Curation Method

Manual annotation from Havana